The Muslim Brotherhood and the Salifist parties are a real force in the Egyptian society. No civil, liberal government can succeed, even after new elections, if the Islamists are forced to work underground as a foe and the country remains divided.
There is no 'master plan' on the road to the Nobel Prize. It represents a lot of hard work, a passion for that work and... being in the right place at the right time. For me, that place was Caltech.
Secularism will not work in Egypt any more than theocracy. What will work is governance that is guided by the Islamic values of the majority with protection of the minority rights.